CDS

Accession Number TCMCG066C24580
gbkey CDS
Protein Id XP_034601555.1
Location complement(join(27820786..27821008,27821622..27821669,27822155..27822345,27824550..27824618,27824718..27824852,27825602..27825757))
Gene LOC117862147
GeneID 117862147
Organism Setaria viridis

Protein

Length 273aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034745664.1
Definition THO complex subunit 4D-like isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
KEGG_TC -
KEGG_Module M00406        [VIEW IN KEGG]
M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12881        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCATATTATGCCAGAAGGGGTGGAGATAGGGGTACTGGCCGTATCCAAGGAAGTGGTGGTAAAGGTGGACATGCCCTGCGTGGAAGATCAGGACTGCCTCCTCGAGGACCTCTCGGGGTTAGCTCCCGACCGTCTGCACGCACAATTGCTAAGTCATTTAGCAGAACCAAAGACATGACCTGGAGACCTGATCTGTTTAGTGATAGTATGGCGGCTAGTGGAATAGAAACTGGTACAAAACTGTACATTTCAAACTTGGACTATGGGGTTTCTAATGAGGATATAAAGGAACTATTTTCAGAAGTTGGTCATTTGAAACGCTTTGCTGTTCACTACGATGGTTATGGCCGCCCAAATGGCACTGCAGAGGTGGTGTTTACACGGAGGAGTGATGCAATTGCTGCACTGAAGCGTTATAATAATGTTCTACTTGATGGAAAAGCTATGAAGATAGAAGTCATTGGAAGTGACTTAGGATTGCCCATGACACCTCGTATAAATGTTGTTGGGGCATCTAATGGCAGAGCTACAAGAACAGTTGTTATGACGCCTGAGTTTAGTCAACGTGGCAGAGGTTCAAGCAGTAGGCCTTTAAGTAATCCGAGCAACAGGTTTAACAACCGTGGTGGTTTCCAAGCTGGTCGAGGCCGTGGTCAGTTCCAGGCTCGTGGCAGGGGCCGTGGACAGTTCCAGGCCCGTGGCAGGGGCCGCGGTCAGTTCCAGGGCCGTGGTGGCAGAGGGAGGAAGCCTGAGAAGACCGCAGATGAGCTGGATAAAGACCTGGAAAGTTATCATGCCGAGGCCATGAAAACCGATTGA
Protein:  
MSYYARRGGDRGTGRIQGSGGKGGHALRGRSGLPPRGPLGVSSRPSARTIAKSFSRTKDMTWRPDLFSDSMAASGIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGSDLGLPMTPRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNPSNRFNNRGGFQAGRGRGQFQARGRGRGQFQARGRGRGQFQGRGGRGRKPEKTADELDKDLESYHAEAMKTD